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TMBETA-GENOME
is a collection of amino acid sequences for all the completed
genomes and the annotated trans beta-barrel membrane proteins (TMBs) using different
discrimination algorithms. For each genome, the calculations
have been performed with statistical methods and machine
learning techniques and the results are accumulated in the
database. For technical details, please refer to the
"Algorithms" page.
TMBETA-GENOME have the feasibility of selecting the organism from the three kingdoms of life, archaea, bacteria and eukaryote. Further, users have the option to select any of the methods or their combinations, and display the results with/without amino acid sequence information. For retreiving beta barrel membrane proteins click on SERVICE. |
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TMBETA-DISC Discrimination of Beta-Barrel Membrane Proteins from Amino Acid Sequence. |
TMBETA-SVM Discrimination of Beta-Barrel Membrane Proteins using Support Vector Machines. |
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TMBETA-NET Prediction of Membrane Spanning b-Strand Segments in Outer Membrane Proteins |
SEVENS Comprehensive Collection of Human 7TM Receptors |
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GENIUS Database System for Assigning Genome ORFs to 2D structures |
GRIFFIN G-Protein and Receptor Interaction Feature Finding INstrument |